Program CANOCO Version 4.0 September 1997 - written by Cajo J.F. ter Braak Copyright (c) 1988-1997 Centre for Biometry Wageningen, CPRO-DLO Box 100, 6700 AC Wageningen, the Netherlands. CANOCO performs (partial) (detrended) (canonical) correspondence analysis, principal components analysis and redundancy analysis. CANOCO is an extension of Cornell Ecology program DECORANA (Hill,1979) For explanation of the input/output see the manual or Ter Braak, C.J.F. (1995) Ordination. Chapter 5 in: Data Analysis in Community and Landscape Ecology (Jongman, R.H.G., Ter Braak, C.J.F. and Van Tongeren, O.F.R., Eds) Cambridge University Press, Cambridge, UK, 91-173 pp. *** Type of analysis *** Model Gradient analysis indirect direct hybrid linear 1=PCA 2= RDA 3 unimodal 4= CA 5= CCA 6 ,, 7=DCA 8=DCCA 9 10=non-standard analysis Type analysis number Answer = 5 *** Data files *** Species data : spid_spe.dta Covariable data : Environmental data : spid_env.dta Initialization file: Forward selection of envi. variables = 0 Scaling of ordination scores = -1 Diagnostics = 3 File : spid_spe.dta Title : VAN DER AART AND SMEENK-ENSERINK (1975) NETH.J.ZOOL.:HUNTING SPIDERS Format : (I6,2X, 12F4.0) No. of couplets of species number and abundance per line : 0 No samples omitted Number of samples 28 Number of species 12 Number of occurrences 182 File : spid_env.dta Title : VAN DER AART AND SMEENK-ENSERINK (1975) NETH.J.ZOOL. SPIDERS-DUNE VARS. Format : (I3,6F8.0) No. of environmental variables : 6 No interaction terms defined Squareroot-transformation of species data No species-weights specified No sample-weights specified No downweighting of rare species Squareroot-transformation of species data No. of active samples: 28 No. of passive samples: 0 No. of active species: 12 Total inertia in species data= Sum of all eigenvalues of CA = 1.14932 1 **** Weighted correlation matrix (weight = sample total) **** SPEC AX1 1.0000 SPEC AX2 .0273 1.0000 SPEC AX3 .0666 .0471 1.0000 SPEC AX4 -.0174 .0397 -.2614 1.0000 ENVI AX1 .9591 .0000 .0000 .0000 1.0000 ENVI AX2 .0000 .9343 .0000 .0000 .0000 1.0000 ENVI AX3 .0000 .0000 .6498 .0000 .0000 .0000 1.0000 ENVI AX4 .0000 .0000 .0000 .7824 .0000 .0000 .0000 1.0000 WaterCon -.8925 -.0793 .0741 .1267 -.9306 -.0849 .1141 .1620 BareSand .6960 .0587 .2908 .2287 .7257 .0628 .4475 .2923 FallTwig -.4076 .7269 -.0845 .1889 -.4250 .7780 -.1300 .2415 CoveMoss .6604 -.2699 -.3926 .1840 .6886 -.2889 -.6042 .2352 CoveHerb -.3115 -.7288 .0982 -.3173 -.3248 -.7801 .1511 -.4055 Refl Lux .6143 -.5477 -.0812 -.3158 .6406 -.5863 -.1249 -.4037 SPEC AX1 SPEC AX2 SPEC AX3 SPEC AX4 ENVI AX1 ENVI AX2 ENVI AX3 ENVI AX4 WaterCon 1.0000 BareSand -.5146 1.0000 FallTwig .4306 -.0909 1.0000 CoveMoss -.6829 .2832 -.3908 1.0000 CoveHerb .2694 -.2795 -.5607 -.1417 1.0000 Refl Lux -.5508 .2934 -.7576 .5558 .3368 1.0000 WaterCon BareSand FallTwig CoveMoss CoveHerb Refl Lux N name (weighted) mean stand. dev. inflation factor 1 SPEC AX1 .0000 1.1190 2 SPEC AX2 .0000 .5583 3 SPEC AX3 .0000 .3995 4 SPEC AX4 .0000 .1779 5 ENVI AX1 .0000 1.0732 6 ENVI AX2 .0000 .5216 7 ENVI AX3 .0000 .2596 8 ENVI AX4 .0000 .1392 1 WaterCon 2.6694 .6842 3.4777 2 BareSand .8275 1.3424 1.4986 3 FallTwig 1.1143 1.7075 3.9478 4 CoveMoss 1.8996 1.3230 2.1570 5 CoveHerb 3.8211 1.0809 2.8834 6 Refl Lux 2.4623 1.3125 3.2310 **** Summary **** Axes 1 2 3 4 Total inertia Eigenvalues : .535 .214 .063 .019 1.149 Species-environment correlations : .959 .934 .650 .782 Cumulative percentage variance of species data : 46.6 65.2 70.7 72.3 of species-environment relation: 63.2 88.5 95.9 98.2 Sum of all unconstrained eigenvalues 1.149 Sum of all canonical eigenvalues .847