[Thu Jan 29 05:24:09 1998] Log file cleared
[Thu Jan 29 05:24:58 1998] Settings changed
[Thu Jan 29 05:25:00 1998] Running CANOCO:
[Thu Jan 29 05:25:00 1998] CON file [C:\canoco\samples\MUTLREGR\parttlx1.con] saved
[Thu Jan 29 05:25:11 1998] CON file [C:\canoco\samples\MUTLREGR\parttlx1.con] saved
 Program CANOCO Version 4.0 September 1997 - written by Cajo J.F. Ter Braak
 Copyright (c) 1988-1997 Centre for Biometry Wageningen, CPRO-DLO
 Box 100, 6700 AC Wageningen, the Netherlands.
 CANOCO performs (partial) (detrended) (canonical) correspondence analysis,
 principal components analysis and redundancy analysis.
 CANOCO is an extension of Cornell Ecology program DECORANA (Hill,1979)

 For explanation of the input/output see the manual or
 Ter Braak, C.J.F. (1995) Ordination. Chapter 5 in:
 Data Analysis in Community and Landscape Ecology
 (Jongman, R.H.G., Ter Braak, C.J.F. and Van Tongeren, O.F.R., Eds)
 Cambridge University Press, Cambridge, UK, 91-173 pp.

 *** Type of analysis ***
  Model             Gradient analysis
               indirect     direct     hybrid
 linear         1=PCA       2= RDA       3
 unimodal       4= CA       5= CCA       6
    ,,          7=DCA       8=DCCA       9
               10=non-standard analysis
 Type analysis number
 Answer =  2


 *** Data files ***
 Species data       : Y_VAR.DTA
 Covariable data    : X_VARS.DTA
 Environmental data : X_VARS.DTA
 Initialization file:  

 Forward selection of envi. variables =    1
 Scaling of ordination scores         =   -1
 Diagnostics                          =    1

 File   : Y_VAR.DTA
 Title  :  response y in 9 units    p(b1) = 0.47                                          
 Format :  FREE      
 Number of species:      1
 Number of samples:      9


 ***WARNING*** End of file detected in species data
 when reading names of species and samples

 No samples omitted
 Number of samples             9
 Number of species             1
 Number of occurrences         9


 File  : X_VARS.DTA
 Title :  five x-variables for 9 units (x1 has no effect)                               
 Format :  FREE                                                                
 No. of             covariables :     5
 No. of samples :                     9


 No interaction terms defined



 ***** WARNING *****
 Missing sample names in file with             covariables
 *************************

 ******************************************************************************
                     Names of covariables
 ******************************************************************************
 x2       x3       x4       x5      
 ******************************************************************************

 File  : X_VARS.DTA
 Title :  five x-variables for 9 units (x1 has no effect)                               
 Format :  FREE                                                                
 No. of environmental variables :     5
 No. of samples :                     9


 No interaction terms defined



 ***** WARNING *****
 Missing sample names in file with environmental variables
 *************************

 No transformation of species data
 No species-weights specified
 No  sample-weights specified
 Centring/standardization by species  =    1
 Centring/standardization by samples  =    0

 No. of active  samples:      9
 No. of passive samples:      0
 No. of active  species:      1

 Total sum of squares in species data =     48.8377    
 Total standard deviation in species data TAU =     2.32947    
 
 
 **** Start of forward selection of variables ****


 *** Unrestricted permutation ***


 Seeds:  13151 16892

    N     Name Extra fit
 
    1 x1             .01
 Environmental variable     1 tested
 Number of permutations= 9999

 *** Permutation under reduced model ***


 P-value  .4642 (variable   1; F-ratio=   .69; number of permutations=  9999)


 Environmental variable     1 added to model
 Variance explained by the variables selected:     .01
    "         "      "      all variables    :     .01

 No more variables to improve fit
*** End of selection ***


    N	name	   (weighted) mean	   stand. dev.	inflation factor

    1	SPEC AX1	         .0000	         .2688
    2	SPEC AX2	         .0000	         .2425
    3	SPEC AX3	         .0000	         .0000
    4	SPEC AX4	         .0000	         .0000
    5	ENVI AX1	         .0000	         .1159
    6	ENVI AX2	         .0000	         .0000
    7	ENVI AX3	         .0000	         .0000
    8	ENVI AX4	         .0000	         .0000
    1	x1      	        1.0789	         .8988	        1.3865


 **** Summary ****

 Axes                               	     1	     2	     3	     4	Total variance

 Eigenvalues                       :	  .013	  .059	  .000	  .000	        1.000
 Species-environment correlations  :	  .431	  .000	  .000	  .000
 Cumulative percentage variance
    of species data                :	  18.6	 100.0	    .0	    .0
    of species-environment relation:	 100.0	    .0	    .0	    .0

 Sum of all unconstrained eigenvalues      	     	      	      	      	   .072
 Sum of all canonical     eigenvalues      	     	      	      	      	   .013


 The sum of all unconstrained eigenvalues is after fitting covariables
 Percentages are taken with respect to residual variances
                 i.e. variances after fitting covariables

 *** MESSAGE ***
 The fit for species is additional to the fit due to covariables.
 With covariables, CANOCO cannot calculate residuals for samples.

[Thu Jan 29 05:25:46 1998] CANOCO call succeeded