[Sun Jan 02 17:46:27 2005] Log file created [Sun Jan 02 17:47:44 2005] Settings changed [Sun Jan 02 17:47:50 2005] CON file [C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\cca_leuk.con] saved [Sun Jan 02 17:47:51 2005] Running CANOCO: [Sun Jan 02 17:47:51 2005] CON file [C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\cca_leuk.con] saved Program CANOCO Version 4.53 June 2004 - written by Cajo J.F. Ter Braak (C) 1988-2003 Biometris - quantitative methods in the life and earth sciences Plant Research International, Wageningen University and Research Centre Box 100, 6700 AC Wageningen, the Netherlands CANOCO performs (partial) (detrended) (canonical) correspondence analysis, principal components analysis and redundancy analysis. CANOCO is an extension of Cornell Ecology program DECORANA (Hill,1979) For explanation of the input/output see the manual or Ter Braak, C.J.F. (1995) Ordination. Chapter 5 in: Data Analysis in Community and Landscape Ecology (Jongman, R.H.G., Ter Braak, C.J.F. and Van Tongeren, O.F.R., Eds) Cambridge University Press, Cambridge, UK, 91-173 pp. *** Type of analysis *** Model Gradient analysis indirect direct hybrid linear 1=PCA 2= RDA 3 unimodal 4= CA 5= CCA 6 ,, 7=DCA 8=DCCA 9 10=non-standard analysis Type analysis number Answer = 5 *** Data files *** Species data : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\species Covariable data : Environmental data : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\environ Initialization file: Forward selection of envi. variables = 3 Scaling of ordination scores = 2 Diagnostics = 3 File : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\species Title : WCanoImp produced data file Format : (I5,1X,14F5.1,35(/6X,(14F5.1))) No. of couplets of species number and abundance per line : 0 No samples omitted Number of samples 154 Number of species 501 Number of occurrences 5037 File : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\environ Title : WCanoImp produced data file Format : (I5,1X,8F9.3) No. of environmental variables : 8 No interaction terms defined No transformation of species data No species-weights specified No sample-weights specified No downweighting of rare species No. of active samples: 154 No. of passive samples: 0 No. of active species: 501 Total inertia in species data= Sum of all eigenvalues of CA = 12.60007 ****** Check on influence in covariable/environment data ****** The following sample(s) have extreme values Sample Environmental Covariable + Environment space variable Influence influence influence 2 1 5.9x 2 2 6.7x 2 5.3x 3 1 5.5x 3 3.0x 7 3.5x 7 1 6.6x 7 7 5.3x 7 5.0x 26 3.0x 27 4 7.7x 27 7 6.5x 27 6.3x 35 8 5.8x 96 5 14.5x 96 9.3x 109 2 5.7x 115 3.5x 115 7 10.1x 115 4.3x 121 3.5x 121 3 8.9x 121 4 12.3x 121 7 5.4x 121 8 9.3x 121 3.6x 124 3.1x 124 5 5.0x 124 4.3x 129 3.3x 129 7 5.1x 138 6 5.2x 138 3.2x 139 4.1x 139 2 5.0x 139 5 5.6x 139 7 6.3x 139 8 10.9x 139 3.8x 143 3.4x 143 2 5.3x 143 3 6.5x 143 3.9x 147 4 7.1x 147 7 8.3x 147 3.1x 152 2 6.0x 152 7 6.2x 153 5 7.9x 154 5.1x 154 1 8.7x 154 3 10.4x 154 4 27.0x 154 5 5.2x 154 8 14.3x 154 6.8x ****** End of check ****** **** Start of forward selection of variables **** *** Unrestricted permutation *** Seeds: 23239 945 N Name Extra fit 2 Expo 0.16 3 Neig 0.19 5 A-Mittel 0.20 6 A-Median 0.21 7 A-Freq 0.32 4 Deck 0.40 8 AZ 0.42 1 H.he 0.55 Environmental variable 1 added to model Variance explained by the variables selected: 0.55 " " " all variables : 2.01 N Name Extra fit 2 Expo 0.16 5 A-Mittel 0.19 3 Neig 0.19 6 A-Median 0.21 7 A-Freq 0.30 4 Deck 0.36 8 AZ 0.36 Environmental variable 4 added to model Variance explained by the variables selected: 0.90 " " " all variables : 2.01 N Name Extra fit 2 Expo 0.16 3 Neig 0.16 6 A-Median 0.17 5 A-Mittel 0.17 8 AZ 0.26 7 A-Freq 0.27 Environmental variable 7 added to model Variance explained by the variables selected: 1.18 " " " all variables : 2.01 N Name Extra fit 6 A-Median 0.10 2 Expo 0.15 5 A-Mittel 0.15 3 Neig 0.15 8 AZ 0.25 Environmental variable 3 added to model Variance explained by the variables selected: 1.33 " " " all variables : 2.01 N Name Extra fit 6 A-Median 0.11 2 Expo 0.15 5 A-Mittel 0.15 8 AZ 0.26 Environmental variable 2 added to model Variance explained by the variables selected: 1.48 " " " all variables : 2.01 N Name Extra fit 6 A-Median 0.11 5 A-Mittel 0.15 8 AZ 0.26 Environmental variable 8 omitted Environmental variable 6 omitted Environmental variable 5 omitted 1 **** Weighted correlation matrix (weight = sample total) **** SPEC AX1 1.0000 SPEC AX2 -0.0050 1.0000 SPEC AX3 0.0068 0.0059 1.0000 SPEC AX4 -0.0190 -0.0631 0.0225 1.0000 ENVI AX1 0.9751 0.0000 0.0000 0.0000 1.0000 ENVI AX2 0.0000 0.9292 0.0000 0.0000 0.0000 1.0000 ENVI AX3 0.0000 0.0000 0.8500 0.0000 0.0000 0.0000 1.0000 ENVI AX4 0.0000 0.0000 0.0000 0.7365 0.0000 0.0000 0.0000 1.0000 H.he 0.9603 -0.1409 -0.0021 -0.0057 0.9849 -0.1517 -0.0025 -0.0077 Expo -0.1066 0.1180 -0.2865 0.4358 -0.1094 0.1270 -0.3370 0.5917 Neig 0.0205 -0.3655 0.2904 -0.4380 0.0211 -0.3933 0.3417 -0.5947 Deck 0.4712 0.8053 -0.0067 -0.0371 0.4832 0.8666 -0.0078 -0.0503 A-Freq -0.3491 -0.3978 -0.6817 -0.1477 -0.3580 -0.4281 -0.8021 -0.2005 SPEC AX1 SPEC AX2 SPEC AX3 SPEC AX4 ENVI AX1 ENVI AX2 ENVI AX3 ENVI AX4 H.he 1.0000 Expo -0.0712 1.0000 Neig 0.1352 -0.0832 1.0000 Deck 0.3543 0.1108 -0.2342 1.0000 A-Freq -0.2900 0.0861 -0.0372 -0.5357 1.0000 H.he Expo Neig Deck A-Freq N name (weighted) mean stand. dev. inflation factor 1 SPEC AX1 0.0000 1.0255 2 SPEC AX2 0.0000 1.0762 3 SPEC AX3 0.0000 1.1765 4 SPEC AX4 0.0000 1.3577 5 ENVI AX1 0.0000 1.0000 6 ENVI AX2 0.0000 1.0000 7 ENVI AX3 0.0000 1.0000 8 ENVI AX4 0.0000 1.0000 1 H.he 1551.8589 361.1049 1.2333 2 Expo 225.9135 38.1177 1.0541 3 Neig 24.2487 8.3829 1.1578 4 Deck 24.9041 25.9873 1.7614 7 A-Freq 6.1443 2.9204 1.5073 **** Summary **** Axes 1 2 3 4 Total inertia Eigenvalues : 0.555 0.355 0.282 0.163 12.600 Species-environment correlations : 0.975 0.929 0.850 0.737 Cumulative percentage variance of species data : 4.4 7.2 9.5 10.8 of species-environment relation: 37.5 61.6 80.6 91.6 Sum of all eigenvalues 12.600 Sum of all canonical eigenvalues 1.479 All four eigenvalues reported above are canonical and correspond to axes that are constrained by the environmental variables. [Sun Jan 02 17:48:38 2005] CANOCO call succeeded [Sun Jan 02 17:49:10 2005] Settings changed [Sun Jan 02 17:49:11 2005] Running CANOCO: [Sun Jan 02 17:49:11 2005] CON file [C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\cca_leuk.con] saved Program CANOCO Version 4.53 June 2004 - written by Cajo J.F. Ter Braak (C) 1988-2003 Biometris - quantitative methods in the life and earth sciences Plant Research International, Wageningen University and Research Centre Box 100, 6700 AC Wageningen, the Netherlands CANOCO performs (partial) (detrended) (canonical) correspondence analysis, principal components analysis and redundancy analysis. CANOCO is an extension of Cornell Ecology program DECORANA (Hill,1979) For explanation of the input/output see the manual or Ter Braak, C.J.F. (1995) Ordination. Chapter 5 in: Data Analysis in Community and Landscape Ecology (Jongman, R.H.G., Ter Braak, C.J.F. and Van Tongeren, O.F.R., Eds) Cambridge University Press, Cambridge, UK, 91-173 pp. *** Type of analysis *** Model Gradient analysis indirect direct hybrid linear 1=PCA 2= RDA 3 unimodal 4= CA 5= CCA 6 ,, 7=DCA 8=DCCA 9 10=non-standard analysis Type analysis number Answer = 5 *** Data files *** Species data : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\species Covariable data : Environmental data : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\environ Initialization file: Forward selection of envi. variables = 3 Scaling of ordination scores = 2 Diagnostics = 3 File : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\species Title : WCanoImp produced data file Format : (I5,1X,14F5.1,35(/6X,(14F5.1))) No. of couplets of species number and abundance per line : 0 No samples omitted Number of samples 154 Number of species 501 Number of occurrences 5037 File : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\environ Title : WCanoImp produced data file Format : (I5,1X,8F9.3) No. of environmental variables : 8 No interaction terms defined No transformation of species data Weight 0.00 is given to species 1 Weight 0.00 is given to species 2 Weight 0.00 is given to species 3 Weight 0.00 is given to species 4 Weight 0.00 is given to species 5 Weight 0.00 is given to species 6 Weight 0.00 is given to species 480 Weight 0.00 is given to species 481 Weight 0.00 is given to species 482 Weight 0.00 is given to species 483 Weight 0.00 is given to species 484 Weight 0.00 is given to species 485 Weight 0.00 is given to species 486 Weight 0.00 is given to species 487 Weight 0.00 is given to species 488 Weight 0.00 is given to species 489 Weight 0.00 is given to species 490 Weight 0.00 is given to species 491 Weight 0.00 is given to species 492 Weight 0.00 is given to species 493 Weight 0.00 is given to species 494 Weight 0.00 is given to species 495 Weight 0.00 is given to species 496 Weight 0.00 is given to species 497 Weight 0.00 is given to species 498 Weight 0.00 is given to species 499 Weight 0.00 is given to species 500 Weight 0.00 is given to species 501 No sample-weights specified No downweighting of rare species No. of active samples: 154 No. of passive samples: 0 No. of active species: 473 Total inertia in species data= Sum of all eigenvalues of CA = 11.88609 ****** Check on influence in covariable/environment data ****** The following sample(s) have extreme values Sample Environmental Covariable + Environment space variable Influence influence influence 1 1 5.9x 2 1 5.8x 2 2 6.3x 2 5.2x 3 3.0x 3 1 6.7x 3 3.5x 7 3.5x 27 4 8.0x 27 7 7.9x 27 6.9x 96 5 15.8x 96 9.8x 109 2 6.5x 121 3.9x 121 3 9.3x 121 4 12.3x 121 7 6.3x 121 8 10.0x 121 3.7x 124 3.5x 124 5 5.3x 124 4.7x 129 3.0x 138 6 5.7x 138 3.3x 139 4.4x 139 2 5.3x 139 5 5.8x 139 7 7.2x 139 8 11.4x 139 4.2x 143 3.9x 143 2 6.0x 143 3 7.2x 143 4.2x 147 3.1x 147 4 7.0x 147 7 9.6x 147 3.3x 152 2 5.7x 152 7 6.4x 153 5 8.4x 153 3.0x 154 5.7x 154 1 9.3x 154 3 11.2x 154 4 28.0x 154 5 5.7x 154 8 15.8x 154 7.1x ****** End of check ****** **** Start of forward selection of variables **** *** Unrestricted permutation *** Seeds: 23239 945 N Name Extra fit 2 Expo 0.15 5 A-Mittel 0.18 6 A-Median 0.18 3 Neig 0.19 7 A-Freq 0.29 4 Deck 0.39 8 AZ 0.40 1 H.he 0.55 Environmental variable 1 added to model Variance explained by the variables selected: 0.55 " " " all variables : 1.88 N Name Extra fit 2 Expo 0.15 5 A-Mittel 0.18 6 A-Median 0.18 3 Neig 0.20 7 A-Freq 0.25 8 AZ 0.34 4 Deck 0.35 Environmental variable 4 added to model Variance explained by the variables selected: 0.90 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.13 2 Expo 0.14 3 Neig 0.16 5 A-Mittel 0.16 7 A-Freq 0.20 8 AZ 0.22 Environmental variable 7 added to model Variance explained by the variables selected: 1.10 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.11 2 Expo 0.13 3 Neig 0.15 5 A-Mittel 0.15 8 AZ 0.22 Environmental variable 3 added to model Variance explained by the variables selected: 1.24 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.11 2 Expo 0.14 5 A-Mittel 0.16 8 AZ 0.22 Environmental variable 2 added to model Variance explained by the variables selected: 1.38 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.11 5 A-Mittel 0.16 8 AZ 0.22 Environmental variable 8 omitted Environmental variable 6 omitted Environmental variable 5 omitted 1 **** Weighted correlation matrix (weight = sample total) **** SPEC AX1 1.0000 SPEC AX2 0.0055 1.0000 SPEC AX3 -0.0149 -0.0143 1.0000 SPEC AX4 0.0171 -0.0119 0.0127 1.0000 ENVI AX1 0.9746 0.0000 0.0000 0.0000 1.0000 ENVI AX2 0.0000 0.9411 0.0000 0.0000 0.0000 1.0000 ENVI AX3 0.0000 0.0000 0.8462 0.0000 0.0000 0.0000 1.0000 ENVI AX4 0.0000 0.0000 0.0000 0.7495 0.0000 0.0000 0.0000 1.0000 H.he -0.9615 -0.1219 -0.0286 -0.0259 -0.9866 -0.1296 -0.0337 -0.0345 Expo 0.0737 0.1848 -0.2901 0.3980 0.0757 0.1963 -0.3428 0.5309 Neig -0.0279 -0.4330 0.3726 -0.3616 -0.0286 -0.4601 0.4403 -0.4824 Deck -0.4309 0.8258 0.0203 -0.1088 -0.4422 0.8775 0.0240 -0.1451 A-Freq 0.3823 -0.4383 -0.6422 -0.1724 0.3923 -0.4657 -0.7590 -0.2300 SPEC AX1 SPEC AX2 SPEC AX3 SPEC AX4 ENVI AX1 ENVI AX2 ENVI AX3 ENVI AX4 H.he 1.0000 Expo -0.0426 1.0000 Neig 0.1413 -0.0514 1.0000 Deck 0.3365 0.1380 -0.2424 1.0000 A-Freq -0.2946 0.0635 -0.0304 -0.5689 1.0000 H.he Expo Neig Deck A-Freq N name (weighted) mean stand. dev. inflation factor 1 SPEC AX1 0.0000 1.0261 2 SPEC AX2 0.0000 1.0626 3 SPEC AX3 0.0000 1.1817 4 SPEC AX4 0.0000 1.3342 5 ENVI AX1 0.0000 1.0000 6 ENVI AX2 0.0000 1.0000 7 ENVI AX3 0.0000 1.0000 8 ENVI AX4 0.0000 1.0000 1 H.he 1572.5792 359.7472 1.2159 2 Expo 225.4675 38.1507 1.0586 3 Neig 24.1732 8.5676 1.1716 4 Deck 26.3647 26.6373 1.8687 7 A-Freq 6.2424 2.8582 1.6042 **** Summary **** Axes 1 2 3 4 Total inertia Eigenvalues : 0.554 0.355 0.207 0.142 11.886 Species-environment correlations : 0.975 0.941 0.846 0.750 Cumulative percentage variance of species data : 4.7 7.6 9.4 10.6 of species-environment relation: 40.2 65.9 80.9 91.2 Sum of all eigenvalues 11.886 Sum of all canonical eigenvalues 1.379 All four eigenvalues reported above are canonical and correspond to axes that are constrained by the environmental variables. [Sun Jan 02 17:49:39 2005] CANOCO call succeeded [Sun Jan 02 17:50:17 2005] Running CANOCO: [Sun Jan 02 17:50:17 2005] CON file [C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\cca_leuk.con] saved Program CANOCO Version 4.53 June 2004 - written by Cajo J.F. Ter Braak (C) 1988-2003 Biometris - quantitative methods in the life and earth sciences Plant Research International, Wageningen University and Research Centre Box 100, 6700 AC Wageningen, the Netherlands CANOCO performs (partial) (detrended) (canonical) correspondence analysis, principal components analysis and redundancy analysis. CANOCO is an extension of Cornell Ecology program DECORANA (Hill,1979) For explanation of the input/output see the manual or Ter Braak, C.J.F. (1995) Ordination. Chapter 5 in: Data Analysis in Community and Landscape Ecology (Jongman, R.H.G., Ter Braak, C.J.F. and Van Tongeren, O.F.R., Eds) Cambridge University Press, Cambridge, UK, 91-173 pp. *** Type of analysis *** Model Gradient analysis indirect direct hybrid linear 1=PCA 2= RDA 3 unimodal 4= CA 5= CCA 6 ,, 7=DCA 8=DCCA 9 10=non-standard analysis Type analysis number Answer = 5 *** Data files *** Species data : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\species Covariable data : Environmental data : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\environ Initialization file: Forward selection of envi. variables = 3 Scaling of ordination scores = 2 Diagnostics = 3 File : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\species Title : WCanoImp produced data file Format : (I5,1X,14F5.1,35(/6X,(14F5.1))) No. of couplets of species number and abundance per line : 0 No samples omitted Number of samples 154 Number of species 501 Number of occurrences 5037 File : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\environ Title : WCanoImp produced data file Format : (I5,1X,8F9.3) No. of environmental variables : 8 No interaction terms defined No transformation of species data Weight 0.00 is given to species 1 Weight 0.00 is given to species 2 Weight 0.00 is given to species 3 Weight 0.00 is given to species 4 Weight 0.00 is given to species 5 Weight 0.00 is given to species 6 Weight 0.00 is given to species 480 Weight 0.00 is given to species 481 Weight 0.00 is given to species 482 Weight 0.00 is given to species 483 Weight 0.00 is given to species 484 Weight 0.00 is given to species 485 Weight 0.00 is given to species 486 Weight 0.00 is given to species 487 Weight 0.00 is given to species 488 Weight 0.00 is given to species 489 Weight 0.00 is given to species 490 Weight 0.00 is given to species 491 Weight 0.00 is given to species 492 Weight 0.00 is given to species 493 Weight 0.00 is given to species 494 Weight 0.00 is given to species 495 Weight 0.00 is given to species 496 Weight 0.00 is given to species 497 Weight 0.00 is given to species 498 Weight 0.00 is given to species 499 Weight 0.00 is given to species 500 Weight 0.00 is given to species 501 No sample-weights specified No downweighting of rare species No. of active samples: 154 No. of passive samples: 0 No. of active species: 473 Total inertia in species data= Sum of all eigenvalues of CA = 11.88609 ****** Check on influence in covariable/environment data ****** The following sample(s) have extreme values Sample Environmental Covariable + Environment space variable Influence influence influence 1 1 5.9x 2 1 5.8x 2 2 6.3x 2 5.2x 3 3.0x 3 1 6.7x 3 3.5x 7 3.5x 27 4 8.0x 27 7 7.9x 27 6.9x 96 5 15.8x 96 9.8x 109 2 6.5x 121 3.9x 121 3 9.3x 121 4 12.3x 121 7 6.3x 121 8 10.0x 121 3.7x 124 3.5x 124 5 5.3x 124 4.7x 129 3.0x 138 6 5.7x 138 3.3x 139 4.4x 139 2 5.3x 139 5 5.8x 139 7 7.2x 139 8 11.4x 139 4.2x 143 3.9x 143 2 6.0x 143 3 7.2x 143 4.2x 147 3.1x 147 4 7.0x 147 7 9.6x 147 3.3x 152 2 5.7x 152 7 6.4x 153 5 8.4x 153 3.0x 154 5.7x 154 1 9.3x 154 3 11.2x 154 4 28.0x 154 5 5.7x 154 8 15.8x 154 7.1x ****** End of check ****** **** Start of forward selection of variables **** *** Unrestricted permutation *** Seeds: 23239 945 N Name Extra fit 2 Expo 0.15 5 A-Mittel 0.18 6 A-Median 0.18 3 Neig 0.19 7 A-Freq 0.29 4 Deck 0.39 8 AZ 0.40 1 H.he 0.55 Environmental variable 1 added to model Variance explained by the variables selected: 0.55 " " " all variables : 1.88 N Name Extra fit 2 Expo 0.15 5 A-Mittel 0.18 6 A-Median 0.18 3 Neig 0.20 7 A-Freq 0.25 8 AZ 0.34 4 Deck 0.35 Environmental variable 4 added to model Variance explained by the variables selected: 0.90 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.13 2 Expo 0.14 3 Neig 0.16 5 A-Mittel 0.16 7 A-Freq 0.20 8 AZ 0.22 Environmental variable 8 added to model Variance explained by the variables selected: 1.12 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.13 2 Expo 0.14 3 Neig 0.15 5 A-Mittel 0.16 7 A-Freq 0.20 Environmental variable 7 added to model Variance explained by the variables selected: 1.32 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.10 2 Expo 0.14 3 Neig 0.14 5 A-Mittel 0.16 Environmental variable 5 added to model Variance explained by the variables selected: 1.47 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.12 2 Expo 0.13 3 Neig 0.15 Environmental variable 3 added to model Variance explained by the variables selected: 1.62 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.12 2 Expo 0.13 Environmental variable 2 added to model Variance explained by the variables selected: 1.76 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.12 Environmental variable 6 added to model Variance explained by the variables selected: 1.88 " " " all variables : 1.88 No more variables to improve fit *** End of selection *** 1 **** Weighted correlation matrix (weight = sample total) **** SPEC AX1 1.0000 SPEC AX2 0.0087 1.0000 SPEC AX3 -0.0055 -0.0325 1.0000 SPEC AX4 -0.0158 -0.0032 -0.0184 1.0000 ENVI AX1 0.9771 0.0000 0.0000 0.0000 1.0000 ENVI AX2 0.0000 0.9436 0.0000 0.0000 0.0000 1.0000 ENVI AX3 0.0000 0.0000 0.8728 0.0000 0.0000 0.0000 1.0000 ENVI AX4 0.0000 0.0000 0.0000 0.8487 0.0000 0.0000 0.0000 1.0000 H.he -0.9568 -0.1345 0.0029 -0.0274 -0.9792 -0.1425 0.0033 -0.0323 Expo 0.0711 0.1727 0.1225 -0.3269 0.0727 0.1831 0.1403 -0.3852 Neig -0.0265 -0.4305 -0.0047 0.3867 -0.0271 -0.4562 -0.0054 0.4557 Deck -0.4353 0.7925 0.2146 0.0232 -0.4456 0.8400 0.2458 0.0273 A-Mittel 0.1438 -0.2530 -0.2277 -0.1222 0.1472 -0.2681 -0.2609 -0.1440 A-Median 0.1784 -0.3998 -0.0375 -0.3249 0.1826 -0.4237 -0.0430 -0.3829 A-Freq 0.3852 -0.4173 -0.1535 -0.6100 0.3942 -0.4423 -0.1759 -0.7187 AZ -0.5261 0.7148 -0.2659 0.0294 -0.5385 0.7575 -0.3047 0.0346 SPEC AX1 SPEC AX2 SPEC AX3 SPEC AX4 ENVI AX1 ENVI AX2 ENVI AX3 ENVI AX4 H.he 1.0000 Expo -0.0426 1.0000 Neig 0.1413 -0.0514 1.0000 Deck 0.3365 0.1380 -0.2424 1.0000 A-Mittel -0.0790 -0.0318 -0.0901 -0.3289 1.0000 A-Median -0.1536 -0.0022 -0.0938 -0.4692 0.7074 1.0000 A-Freq -0.2946 0.0635 -0.0304 -0.5689 0.4486 0.6804 1.0000 AZ 0.4104 0.0264 -0.2568 0.8014 -0.3842 -0.5017 -0.5280 1.0000 H.he Expo Neig Deck A-Mittel A-Median A-Freq AZ N name (weighted) mean stand. dev. inflation factor 1 SPEC AX1 0.0000 1.0235 2 SPEC AX2 0.0000 1.0598 3 SPEC AX3 0.0000 1.1458 4 SPEC AX4 0.0000 1.1783 5 ENVI AX1 0.0000 1.0000 6 ENVI AX2 0.0000 1.0000 7 ENVI AX3 0.0000 1.0000 8 ENVI AX4 0.0000 1.0000 1 H.he 1572.5792 359.7472 1.3788 2 Expo 225.4675 38.1507 1.0739 3 Neig 24.1732 8.5676 1.3016 4 Deck 26.3647 26.6373 3.2834 5 A-Mittel 2.3056 1.8090 2.0444 6 A-Median 1.5747 1.4569 3.1482 7 A-Freq 6.2424 2.8582 2.3182 8 AZ 49.8129 23.0194 3.4861 **** Summary **** Axes 1 2 3 4 Total inertia Eigenvalues : 0.560 0.365 0.217 0.209 11.886 Species-environment correlations : 0.977 0.944 0.873 0.849 Cumulative percentage variance of species data : 4.7 7.8 9.6 11.4 of species-environment relation: 29.7 49.1 60.6 71.8 Sum of all eigenvalues 11.886 Sum of all canonical eigenvalues 1.882 All four eigenvalues reported above are canonical and correspond to axes that are constrained by the environmental variables. [Sun Jan 02 17:50:34 2005] CANOCO call succeeded [Sun Jan 02 17:50:41 2005] Running CANOCO: [Sun Jan 02 17:50:41 2005] CON file [C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\cca_leuk.con] saved Program CANOCO Version 4.53 June 2004 - written by Cajo J.F. Ter Braak (C) 1988-2003 Biometris - quantitative methods in the life and earth sciences Plant Research International, Wageningen University and Research Centre Box 100, 6700 AC Wageningen, the Netherlands CANOCO performs (partial) (detrended) (canonical) correspondence analysis, principal components analysis and redundancy analysis. CANOCO is an extension of Cornell Ecology program DECORANA (Hill,1979) For explanation of the input/output see the manual or Ter Braak, C.J.F. (1995) Ordination. Chapter 5 in: Data Analysis in Community and Landscape Ecology (Jongman, R.H.G., Ter Braak, C.J.F. and Van Tongeren, O.F.R., Eds) Cambridge University Press, Cambridge, UK, 91-173 pp. *** Type of analysis *** Model Gradient analysis indirect direct hybrid linear 1=PCA 2= RDA 3 unimodal 4= CA 5= CCA 6 ,, 7=DCA 8=DCCA 9 10=non-standard analysis Type analysis number Answer = 5 *** Data files *** Species data : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\species Covariable data : Environmental data : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\environ Initialization file: Forward selection of envi. variables = 3 Scaling of ordination scores = 2 Diagnostics = 3 File : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\species Title : WCanoImp produced data file Format : (I5,1X,14F5.1,35(/6X,(14F5.1))) No. of couplets of species number and abundance per line : 0 No samples omitted Number of samples 154 Number of species 501 Number of occurrences 5037 File : C:\Dokumente und Einstellungen\Tom Wohlgemuth\Eigene Dateien\Daten\canotrial05\environ Title : WCanoImp produced data file Format : (I5,1X,8F9.3) No. of environmental variables : 8 No interaction terms defined No transformation of species data Weight 0.00 is given to species 1 Weight 0.00 is given to species 2 Weight 0.00 is given to species 3 Weight 0.00 is given to species 4 Weight 0.00 is given to species 5 Weight 0.00 is given to species 6 Weight 0.00 is given to species 480 Weight 0.00 is given to species 481 Weight 0.00 is given to species 482 Weight 0.00 is given to species 483 Weight 0.00 is given to species 484 Weight 0.00 is given to species 485 Weight 0.00 is given to species 486 Weight 0.00 is given to species 487 Weight 0.00 is given to species 488 Weight 0.00 is given to species 489 Weight 0.00 is given to species 490 Weight 0.00 is given to species 491 Weight 0.00 is given to species 492 Weight 0.00 is given to species 493 Weight 0.00 is given to species 494 Weight 0.00 is given to species 495 Weight 0.00 is given to species 496 Weight 0.00 is given to species 497 Weight 0.00 is given to species 498 Weight 0.00 is given to species 499 Weight 0.00 is given to species 500 Weight 0.00 is given to species 501 No sample-weights specified No downweighting of rare species No. of active samples: 154 No. of passive samples: 0 No. of active species: 473 Total inertia in species data= Sum of all eigenvalues of CA = 11.88609 ****** Check on influence in covariable/environment data ****** The following sample(s) have extreme values Sample Environmental Covariable + Environment space variable Influence influence influence 1 1 5.9x 2 1 5.8x 2 2 6.3x 2 5.2x 3 3.0x 3 1 6.7x 3 3.5x 7 3.5x 27 4 8.0x 27 7 7.9x 27 6.9x 96 5 15.8x 96 9.8x 109 2 6.5x 121 3.9x 121 3 9.3x 121 4 12.3x 121 7 6.3x 121 8 10.0x 121 3.7x 124 3.5x 124 5 5.3x 124 4.7x 129 3.0x 138 6 5.7x 138 3.3x 139 4.4x 139 2 5.3x 139 5 5.8x 139 7 7.2x 139 8 11.4x 139 4.2x 143 3.9x 143 2 6.0x 143 3 7.2x 143 4.2x 147 3.1x 147 4 7.0x 147 7 9.6x 147 3.3x 152 2 5.7x 152 7 6.4x 153 5 8.4x 153 3.0x 154 5.7x 154 1 9.3x 154 3 11.2x 154 4 28.0x 154 5 5.7x 154 8 15.8x 154 7.1x ****** End of check ****** **** Start of forward selection of variables **** *** Unrestricted permutation *** Seeds: 23239 945 N Name Extra fit 2 Expo 0.15 5 A-Mittel 0.18 6 A-Median 0.18 3 Neig 0.19 7 A-Freq 0.29 4 Deck 0.39 8 AZ 0.40 1 H.he 0.55 Environmental variable 1 added to model Variance explained by the variables selected: 0.55 " " " all variables : 1.88 N Name Extra fit 2 Expo 0.15 5 A-Mittel 0.18 6 A-Median 0.18 3 Neig 0.20 7 A-Freq 0.25 8 AZ 0.34 4 Deck 0.35 Environmental variable 4 added to model Variance explained by the variables selected: 0.90 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.13 2 Expo 0.14 3 Neig 0.16 5 A-Mittel 0.16 7 A-Freq 0.20 8 AZ 0.22 Environmental variable 7 added to model Variance explained by the variables selected: 1.10 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.11 2 Expo 0.13 3 Neig 0.15 5 A-Mittel 0.15 8 AZ 0.22 Environmental variable 5 added to model Variance explained by the variables selected: 1.25 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.13 2 Expo 0.13 3 Neig 0.15 8 AZ 0.23 Environmental variable 3 added to model Variance explained by the variables selected: 1.40 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.13 2 Expo 0.13 8 AZ 0.22 Environmental variable 2 added to model Variance explained by the variables selected: 1.53 " " " all variables : 1.88 N Name Extra fit 6 A-Median 0.13 8 AZ 0.22 Environmental variable 6 added to model Variance explained by the variables selected: 1.66 " " " all variables : 1.88 N Name Extra fit 8 AZ 0.22 Environmental variable 8 omitted 1 **** Weighted correlation matrix (weight = sample total) **** SPEC AX1 1.0000 SPEC AX2 0.0057 1.0000 SPEC AX3 -0.0154 -0.0083 1.0000 SPEC AX4 0.0104 0.0429 -0.0078 1.0000 ENVI AX1 0.9761 0.0000 0.0000 0.0000 1.0000 ENVI AX2 0.0000 0.9409 0.0000 0.0000 0.0000 1.0000 ENVI AX3 0.0000 0.0000 0.8493 0.0000 0.0000 0.0000 1.0000 ENVI AX4 0.0000 0.0000 0.0000 0.8354 0.0000 0.0000 0.0000 1.0000 H.he -0.9593 -0.1130 -0.0275 0.0559 -0.9828 -0.1201 -0.0324 0.0669 Expo 0.0723 0.1831 -0.3214 -0.2545 0.0741 0.1946 -0.3785 -0.3046 Neig -0.0329 -0.4356 0.3871 -0.0092 -0.0337 -0.4629 0.4558 -0.0110 Deck -0.4257 0.8281 0.0310 0.0257 -0.4361 0.8801 0.0364 0.0308 A-Mittel 0.1412 -0.2695 -0.1328 0.6431 0.1447 -0.2864 -0.1563 0.7698 A-Median 0.1715 -0.4041 -0.3263 0.1759 0.1757 -0.4295 -0.3842 0.2106 A-Freq 0.3801 -0.4394 -0.6159 0.1678 0.3894 -0.4670 -0.7252 0.2009 SPEC AX1 SPEC AX2 SPEC AX3 SPEC AX4 ENVI AX1 ENVI AX2 ENVI AX3 ENVI AX4 H.he 1.0000 Expo -0.0426 1.0000 Neig 0.1413 -0.0514 1.0000 Deck 0.3365 0.1380 -0.2424 1.0000 A-Mittel -0.0790 -0.0318 -0.0901 -0.3289 1.0000 A-Median -0.1536 -0.0022 -0.0938 -0.4692 0.7074 1.0000 A-Freq -0.2946 0.0635 -0.0304 -0.5689 0.4486 0.6804 1.0000 H.he Expo Neig Deck A-Mittel A-Median A-Freq N name (weighted) mean stand. dev. inflation factor 1 SPEC AX1 0.0000 1.0245 2 SPEC AX2 0.0000 1.0628 3 SPEC AX3 0.0000 1.1775 4 SPEC AX4 0.0000 1.1970 5 ENVI AX1 0.0000 1.0000 6 ENVI AX2 0.0000 1.0000 7 ENVI AX3 0.0000 1.0000 8 ENVI AX4 0.0000 1.0000 1 H.he 1572.5792 359.7472 1.2410 2 Expo 225.4675 38.1507 1.0600 3 Neig 24.1732 8.5676 1.2132 4 Deck 26.3647 26.6373 1.9490 5 A-Mittel 2.3056 1.8090 2.0197 6 A-Median 1.5747 1.4569 3.0676 7 A-Freq 6.2424 2.8582 2.3163 **** Summary **** Axes 1 2 3 4 Total inertia Eigenvalues : 0.558 0.356 0.209 0.180 11.886 Species-environment correlations : 0.976 0.941 0.849 0.835 Cumulative percentage variance of species data : 4.7 7.7 9.4 11.0 of species-environment relation: 33.5 54.9 67.5 78.3 Sum of all eigenvalues 11.886 Sum of all canonical eigenvalues 1.665 All four eigenvalues reported above are canonical and correspond to axes that are constrained by the environmental variables. [Sun Jan 02 17:51:02 2005] CANOCO call succeeded